Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015867112.1_cds_XP_016432986.1_29179
CDS Infomation

[gene=LOC107759533] [db_xref=GeneID:107759533] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016432986.1] [location=join(105106..105984,106397..107017)] [gbkey=CDS]
Sequence

ATGCAGTTCTTCAACTTCTTTTCCCTTTTCCTTTTTGTGTCTTTCCTCTTTTTATTTAAG
AAATGGAAGAATTCCGGTAGCCAAACCAAAAGATTGCCTCCAGGTCCATGGAAATTACCT
ATTCTTGGAAGCATGCTTCATTTGCTAGGTGGACATCCACATCATGTCCTTAGAGATTTA
GCCAAAAAATATGGTCCACTTATGCACCTTCAACTAGGTGAAGTTTCTCTAGTTGTTGTT
ACGTCTCCTGAGATGGCAAAAGAAGTGCTAAAAACTCATGACCTCGCTTTTGCATCTAGA
CCTTTACTTTTAGCTGCCAAGATTGTTTGTTATAATGGGACGGACATTGTCTTTTCTCCC
TATGGAAATTACTGGAGACAGATGCGTAAAATTTGTCTCTTGGAATTGCTCAGTTCCAAA
AGCGTCAAGTCATTCAACTCAATTAGACAAGATGAAGTTCATCGTATGATTGAATTTTTT
CGATCATCTCCTGGTAAGCCGGTTAATGTAACAAAAAGGTTTGCTCTATTCACAAGCTCT
ATGACATGTAGATCAGCCTTTGGACAAGAACACAAGGAGCAAGATGAATTTGTACGACTA
GTCAAAAAAGTGTCAAACTATATGGAAGGGTTTGATGTGGCTGATATATTCCCTTCATTG
AAGTTTCTTCATGTGCTTACTGGAATGAAGGCTAAAGTGATGGATGCACACCATGAATTA
GATGAGATTCTTGAAAATATCATCACTGAGCGCAAGAAGGTTGCAAAGACCAATTGCGAA
TCAAGAGGTGAAGGTATAGTTGATGTACTGCTAAGACTTATGAAGGAAGGAGGCCTTCAA
TTTCCAATCACTAACGGCAACATCAAAGCTATTGTCTTTGACATGTTTGCTGCGGGAACA
GAAACTTCATCAACAACAATTAATTGGGCCATGGTCGAAATGATGAAGAAGCCAAGTGTA
TTTGCCAAAGCTCAAGCAGAGGTAAGAAAAATCTTGAGAGGGAAAGAAACTTTTAGTGAA
ATTGATGTCGAGGAGTTCAAATACCTAAAGATGGTCATTAAAGAAACTTTCAGACTCCAC
CCTCCACTACCTCTTTTGCTTCCAAGAGAATGTAGAGAAGAAACAGACTTAAACGGCTAC
ACTATTCCATTGAAAACAAAAGTCGTGGTTAATGTTTGGGCAATGGGAAGAGATCCAAAA
TATTGGGATGATGTAGAAAGCTTTAAACCTGAGAGATTTGAGAATAACTCGATGGATTAT
ATTGGTAATAATTTTGAATATCTTCCCTTTGGTGGCGGAAGGAGAATTTGCCCTGGAATA
TCATTTGGTTTAGCAAATGTTTATTTTCCACTGGCTCAATTGTTGTATCACTTTGACTGG
AAACTCCCAACTGGAATCAATCCAAGTGAACTAGACTTAACTGAGGCGGCTGGAGCAGCT
TGTGCTAGAAAGAATGACCTACACTTGATCGCTACTCCCTATCAACCTTGTCAAGAGTAA

Peptide Sequence

PEP ID

XP_016432986.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MQFFNFFSLFLFVSFLFLFKKWKNSGSQTKRLPPGPWKLPILGSMLHLLGGHPHHVLRDL
AKKYGPLMHLQLGEVSLVVVTSPEMAKEVLKTHDLAFASRPLLLAAKIVCYNGTDIVFSP
YGNYWRQMRKICLLELLSSKSVKSFNSIRQDEVHRMIEFFRSSPGKPVNVTKRFALFTSS
MTCRSAFGQEHKEQDEFVRLVKKVSNYMEGFDVADIFPSLKFLHVLTGMKAKVMDAHHEL
DEILENIITERKKVAKTNCESRGEGIVDVLLRLMKEGGLQFPITNGNIKAIVFDMFAAGT
ETSSTTINWAMVEMMKKPSVFAKAQAEVRKILRGKETFSEIDVEEFKYLKMVIKETFRLH
PPLPLLLPRECREETDLNGYTIPLKTKVVVNVWAMGRDPKYWDDVESFKPERFENNSMDY
IGNNFEYLPFGGGRRICPGISFGLANVYFPLAQLLYHFDWKLPTGINPSELDLTEAAGAA
CARKNDLHLIATPYQPCQE

Transcript Sequence

Gene sequence data has not been registered.